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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNA2D1Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2. (1002 aa)    
Predicted Functional Partners:
CAMK2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1.
   
 
 0.913
PRKACB
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
 
  0.901
ENSPMJP00000003141
annotation not available
 
      0.878
CACNA1D
Voltage-dependent L-type calcium channel subunit alpha-1D isoform X1.
   
 0.768
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4 isoform X1.
   
 0.749
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2 isoform X1.
   
 0.740
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 0.728
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 0.728
CACNG1
Voltage-dependent calcium channel gamma-1 subunit.
    
 
 0.715
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.710
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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