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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN7CProtein lin-7 homolog C isoform X1. (186 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.994
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.852
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
    
 
 0.792
MPP6
MAGUK p55 subfamily member 6 isoform X1.
    
 0.738
ENSPMJP00000017678
MAGUK p55 subfamily member 2-like.
    
 0.738
APBA1
Amyloid beta A4 precursor protein-binding family A member 1 isoform X1.
    
 0.728
CAMK2D
Calcium/calmodulin dependent protein kinase II delta.
    
 0.712
CAMK2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1.
    
 0.712
CAMK2B
Serine/threonine-protein kinase BRSK1-like.
    
 0.712
MPP5
MAGUK p55 subfamily member 5.
    
 0.647
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.