Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CTIFCBP80/20-dependent translation initiation factor isoform X1. (612 aa)    
Predicted Functional Partners:
LOC107213746
ATP-dependent RNA helicase DDX19A isoform X1.
    
   0.867
NCBP1
Nuclear cap-binding protein subunit 1.
    
 
 0.773
SLBP
Histone RNA hairpin-binding protein.
    
 
 0.724
TSPAN4
Tetraspanin-4 isoform X1.
      
 0.682
LIPG
Endothelial lipase isoform X1.
      
 0.681
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial isoform X1.
      
 0.674
ENSPMJP00000021497
annotation not available
      
 0.672
SKA1
Spindle and kinetochore-associated protein 1.
      
 0.665
DYM
Dymeclin isoform X1.
      
 0.640
SNCAIP
Synphilin-1 isoform X1.
      
 0.635
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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