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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.714
YBX1
Nuclease-sensitive element-binding protein 1 isoform X1.
   
 0.655
SRSF3
Splicing factor, arginine/serine-rich 3.
   
 0.644
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.621
ENSPMJP00000017989
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.620
SRSF1
Splicing factor, arginine/serine-rich 1.
   
 0.620
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.599
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H isoform X1.
   
 0.590
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.590
TRA2B
Transformer-2 protein homolog beta isoform X1.
   
 0.531
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.