STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CERS2Ceramide synthase 2. (376 aa)    
Predicted Functional Partners:
ACER3
Alkaline ceramidase 3.
    
 0.959
KDSR
3-ketodihydrosphingosine reductase.
     
 0.939
DEGS2
Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 isoform X1.
   
 0.935
DEGS1
Sphingolipid 4-desaturase/C4-monooxygenase.
   
 0.933
SGPP1
Sphingosine-1-phosphate phosphatase 1.
    
 0.928
UGCG
Ceramide glucosyltransferase.
     
 0.927
CERK
Ceramide kinase.
     
 0.927
ASAH2
Neutral ceramidase.
     
 0.927
SPHK1
Sphingosine kinase 1.
     
 0.926
PLPP2
Phospholipid phosphatase 2 isoform X1.
    
 0.925
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.