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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUNE1Protein prune homolog. (422 aa)    
Predicted Functional Partners:
HDDC3
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1.
     
  0.900
IP6K1
Inositol hexakisphosphate kinase 1 isoform X1.
      
 0.533
UTP20
Small subunit processome component 20 homolog.
      
 0.531
SMPD1
Sphingomyelin phosphodiesterase.
    
 
 0.529
SMPDL3B
Acid sphingomyelinase-like phosphodiesterase 3b isoform X1.
    
 
 0.529
MMS19
MMS19 nucleotide excision repair protein homolog isoform X1.
      
 0.469
LOC107212695
Argininosuccinate lyase.
      
 0.469
NUDT4
Diphosphoinositol polyphosphate phosphohydrolase 2 isoform X1.
     
 0.454
SPRTN
SprT-like domain-containing protein Spartan.
      
 0.453
GSK3B
Glycogen synthase kinase-3 beta isoform X1.
    
 
 0.437
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.