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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107202821Transcription initiation factor TFIIE subunit alpha. (424 aa)    
Predicted Functional Partners:
GTF2E2
Transcription initiation factor TFIIE subunit beta.
   
 0.965
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.960
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.959
LOC107199443
Transcription initiation factor TFIIF subunit alpha.
    
 0.957
GTF2H1
General transcription factor IIH subunit 1 isoform X1.
   
 0.957
GTF2F2
Transcription initiation factor TFIIF subunit beta.
   
 0.957
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.957
ENSPMJP00000007827
annotation not available
    
 0.953
POLR2K
RNA polymerase II subunit K.
    
 0.949
GTF2H2
General transcription factor IIH subunit 2.
   
 0.947
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.