Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALYREF | CASC3 | ENSPMJP00000020492 | ENSPMJP00000024373 | THO complex subunit 4. | Protein CASC3. | 0.676 |
ALYREF | CWC22 | ENSPMJP00000020492 | ENSPMJP00000025040 | THO complex subunit 4. | Pre-mRNA-splicing factor CWC22 homolog. | 0.902 |
ALYREF | EIF4A3 | ENSPMJP00000020492 | ENSPMJP00000003649 | THO complex subunit 4. | Eukaryotic initiation factor 4A-III. | 0.994 |
ALYREF | MAGOH | ENSPMJP00000020492 | ENSPMJP00000001646 | THO complex subunit 4. | Mago homolog, exon junction complex subunit. | 0.949 |
ALYREF | RANBP2 | ENSPMJP00000020492 | ENSPMJP00000015318 | THO complex subunit 4. | E3 SUMO-protein ligase RanBP2 isoform X1. | 0.949 |
ALYREF | RBM8A | ENSPMJP00000020492 | ENSPMJP00000001980 | THO complex subunit 4. | RNA-binding protein 8A. | 0.944 |
ALYREF | RNPS1 | ENSPMJP00000020492 | ENSPMJP00000010431 | THO complex subunit 4. | RNA-binding protein with serine-rich domain 1 isoform X1. | 0.953 |
ALYREF | SRSF1 | ENSPMJP00000020492 | ENSPMJP00000027281 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 1. | 0.894 |
ALYREF | SRSF3 | ENSPMJP00000020492 | ENSPMJP00000015785 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 3. | 0.841 |
CASC3 | ALYREF | ENSPMJP00000024373 | ENSPMJP00000020492 | Protein CASC3. | THO complex subunit 4. | 0.676 |
CASC3 | CWC22 | ENSPMJP00000024373 | ENSPMJP00000025040 | Protein CASC3. | Pre-mRNA-splicing factor CWC22 homolog. | 0.676 |
CASC3 | EIF4A3 | ENSPMJP00000024373 | ENSPMJP00000003649 | Protein CASC3. | Eukaryotic initiation factor 4A-III. | 0.998 |
CASC3 | MAGOH | ENSPMJP00000024373 | ENSPMJP00000001646 | Protein CASC3. | Mago homolog, exon junction complex subunit. | 0.978 |
CASC3 | RANBP2 | ENSPMJP00000024373 | ENSPMJP00000015318 | Protein CASC3. | E3 SUMO-protein ligase RanBP2 isoform X1. | 0.928 |
CASC3 | RBM8A | ENSPMJP00000024373 | ENSPMJP00000001980 | Protein CASC3. | RNA-binding protein 8A. | 0.999 |
CASC3 | RNPS1 | ENSPMJP00000024373 | ENSPMJP00000010431 | Protein CASC3. | RNA-binding protein with serine-rich domain 1 isoform X1. | 0.819 |
CASC3 | SRSF1 | ENSPMJP00000024373 | ENSPMJP00000027281 | Protein CASC3. | Splicing factor, arginine/serine-rich 1. | 0.599 |
CASC3 | SRSF3 | ENSPMJP00000024373 | ENSPMJP00000015785 | Protein CASC3. | Splicing factor, arginine/serine-rich 3. | 0.616 |
CWC22 | ALYREF | ENSPMJP00000025040 | ENSPMJP00000020492 | Pre-mRNA-splicing factor CWC22 homolog. | THO complex subunit 4. | 0.902 |
CWC22 | CASC3 | ENSPMJP00000025040 | ENSPMJP00000024373 | Pre-mRNA-splicing factor CWC22 homolog. | Protein CASC3. | 0.676 |
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