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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis-associated protein 16 isoform X1. (564 aa)    
Predicted Functional Partners:
CCDC62
Coiled-coil domain-containing protein 62 isoform X1.
      
 0.655
DPY19L1
Probable C-mannosyltransferase DPY19L1.
      
 0.536
SPATA18
Mitochondria-eating protein.
      
 0.533
RTF2
Protein RTF2 homolog.
      
 0.533
GOLGA3
Golgin subfamily A member 3 isoform X1.
      
 0.465
GOPC
Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1.
      
 0.455
MEA1
Male-enhanced antigen 1.
      
 0.447
PICK1
PRKCA-binding protein.
      
 0.446
TMEM238
Transmembrane protein 238.
   
  
 0.410
C1AH12orf40
Uncharacterized protein C12orf40 homolog.
      
 0.407
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.