Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TSKUTsukushi (leucine-rich repeat-containing protein 54). (352 aa)    
Predicted Functional Partners:
P2RY2
P2Y purinoceptor 2.
  
   
 0.729
ISY1
Pre-mRNA-splicing factor ISY1 homolog isoform X1.
    
 
 0.682
HSPA13
Stress 70 protein chaperone microsome-associated 60kDa protein.
    
 
 0.581
P2RY6
P2Y purinoceptor 6 isoform X1.
      
 0.571
ARHGEF17
Rho guanine nucleotide exchange factor 17.
   
  
 0.570
ACER3
Alkaline ceramidase 3.
      
 0.569
EPDR1
Mammalian ependymin-related protein 1.
      
 0.546
FCHSD2
F-BAR and double SH3 domains protein 2 isoform X1.
     
 0.544
RAB19
Ras-related protein Rab-19.
    
 
 0.544
FZD4
Frizzled 4.
    
 
 0.543
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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