Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANKRD27Ankyrin repeat domain-containing protein 27. (1061 aa)    
Predicted Functional Partners:
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.910
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
    
 
 0.760
UBXN11
UBX domain-containing protein 11 isoform X1.
    
 0.711
RABEP1
Rab GTPase-binding effector protein 1 isoform X1.
   
 0.704
RICTOR
Rapamycin-insensitive companion of mTOR.
    
 
 0.695
RAB38
Ras-related protein Rab-38.
    
 
 0.688
RAB32
Ras-related protein Rab-32.
    
 
 0.688
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B.
     
 0.683
NFKBIA
NF-kappa-B inhibitor alpha.
    
   0.609
ALS2
Amyotrophic lateral sclerosis 2 protein.
    
 0.609
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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