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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF622Zinc finger protein 622. (470 aa)    
Predicted Functional Partners:
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.927
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.909
LSG1
Large subunit GTPase 1 homolog.
   
 
 0.906
RPL24
Large subunit ribosomal protein L24e.
    
 
 0.786
RPL23A
Large subunit ribosomal protein L23Ae.
   
 
 0.772
RPL22L1
Large subunit ribosomal protein L22e.
    
   0.749
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
 
 0.746
GNL2
Nucleolar GTP-binding protein 2.
   
 
 0.738
RPL17-C18orf32
Large subunit ribosomal protein L17e.
    
 
 0.731
RPL29
Large subunit ribosomal protein L29e.
    
 
 0.728
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.