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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP36Ribosomal RNA processing protein 36 homolog. (273 aa)    
Predicted Functional Partners:
RRP9
U3 small nucleolar RNA-interacting protein 2.
   
 0.988
UTP25
U3 small nucleolar RNA-associated protein 25.
   
 0.988
UTP3
U3 small nucleolar RNA-associated protein 3.
   
 0.987
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
   
 0.976
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
 0.974
KRR1
KRR1 small subunit processome component homolog isoform X1.
   
 0.966
LOC107209693
Pancreatic secretory granule membrane major glycoprotein GP2-like.
   
 0.965
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 0.958
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
 
 0.956
BYSL
Essential nuclear protein 1.
   
 
 0.954
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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