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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AICDASingle-stranded DNA cytosine deaminase isoform X1. (198 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.988
COX7C
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.983
COA6
Cytochrome c oxidase assembly factor 6 homolog.
   
 0.975
UQCRB
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.967
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.959
UQCRQ
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.959
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
 0.958
LOC107208290
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.958
COX1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
 0.956
C1orf198
Uncharacterized protein C1orf198 homolog.
   
 0.950
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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