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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107211083Homeobox protein NANOG-like. (325 aa)    
Predicted Functional Partners:
RMC1
Uncharacterized protein C18orf8 homolog isoform X1.
      
 0.520
HBS1L
Elongation factor 1 alpha-like protein.
      
 0.510
SERBP1
SERPINE1 mRNA binding protein 1.
      
 0.508
RMI1
RecQ-mediated genome instability protein 1.
      
 0.476
ENSPMJP00000003366
Feather keratin Cos2-2-like.
  
     0.471
LOC107214647
Feather beta keratin.
  
     0.444
ENSPMJP00000003368
Feather keratin Cos1-1/Cos1-3/Cos2-1-like.
  
     0.431
ENSPMJP00000001838
annotation not available
  
     0.421
ENSPMJP00000003378
Feather keratin 1-like.
  
     0.418
ENSPMJP00000003293
annotation not available
  
     0.416
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.