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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107208256Cytochrome P450 family 2 subfamily J. (492 aa)    
Predicted Functional Partners:
LOC107211377
Cytochrome P450 family 3 subfamily A.
  
0.935
LOC107210919
Cytochrome P450 family 3 subfamily A.
  
0.935
PLA2G12B
Group XIIB secretory phospholipase A2-like protein isoform X1.
   
 
 0.915
PROCA1
Secretory phospholipase A2.
    
 0.914
CYP2U1
Cytochrome P450 family 2 subfamily U polypeptide 1.
  
 
 
0.913
LOC107212622
Cytochrome P450 family 2 subfamily C.
  
  
 
0.906
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 
 0.903
ALOX5
Arachidonate 5-lipoxygenase isoform X1.
    
 0.903
PLA2G4A
Cytosolic phospholipase A2.
    
 0.902
PLA2G6
85/88 kDa calcium-independent phospholipase A2 isoform X1.
     
 0.901
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.