STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM2BF-box and leucine-rich repeat protein 10/11. (1256 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
   
 0.999
LOC107199423
NEDD8-like.
    
 0.964
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
    
 0.924
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 
 0.924
RYBP
RING1 and YY1-binding protein isoform X1.
    
 
 0.901
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.880
OASL
2'-5'-oligoadenylate synthase-like protein.
    
 0.874
ENSPMJP00000027002
Ubiquitin.
    
 0.874
CACUL1
CDK2-associated and cullin domain-containing protein 1 isoform X1.
    
 0.867
CUL3
Cullin 3.
    
 0.867
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.