close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRCC6X-ray repair cross-complementing protein 6 isoform X1. (613 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross-complementing protein 5 isoform X1.
   
 0.999
WRN
Werner syndrome ATP-dependent helicase isoform X1.
   
 
 0.994
LIG4
DNA ligase 4.
   
 0.984
PRKDC
DNA-dependent protein kinase catalytic subunit isoform X1.
    
 0.984
MRE11
Double-strand break repair protein MRE11A isoform X1.
   
 0.978
LIG3
DNA ligase 3 isoform X1.
   
 0.942
DCLRE1C
DNA cross-link repair 1C protein.
   
 0.940
ATM
Serine-protein kinase ATM isoform X1.
    
 0.938
RAD50
DNA repair protein RAD50.
   
 0.936
BLM
BLM RecQ like helicase.
   
 
 0.933
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.