close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCA5Lebercilin. (682 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex subunit 5.
   
 0.912
TRAPPC4
Trafficking protein particle complex subunit 4.
   
 0.897
TRAPPC6B
Trafficking protein particle complex subunit 6B isoform X1.
   
 0.895
TRAPPC2B
Trafficking protein particle complex subunit 2.
    
 0.893
TRAPPC9
Trafficking protein particle complex subunit 9 isoform X1.
    
 0.893
TRAPPC8
Trafficking protein particle complex subunit 8 isoform X1.
    
 0.893
TRAPPC10
Trafficking protein particle complex subunit 10.
    
 0.891
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.890
TRAPPC11
Trafficking protein particle complex subunit 11.
    
 0.862
TRAPPC12
Trafficking protein particle complex subunit 12 isoform X1.
    
 0.795
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.