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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS33AVacuolar protein sorting-associated protein 33A isoform X1. (582 aa)    
Predicted Functional Partners:
VPS18
Vacuolar protein sorting-associated protein 18 homolog.
   
 0.997
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
   
 0.996
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 0.994
TGFBRAP1
Transforming growth factor-beta receptor-associated protein 1.
   
 0.930
VPS8
VPS8 subunit of CORVET complex.
    
 
 0.907
VAMP8
Vesicle-associated membrane protein 8.
   
 
 0.895
CCZ1
Vacuolar fusion protein CCZ1 homolog.
    
 
 0.894
VIPAS39
VPS33B-interacting protein in polarity and apical restriction.
   
 
 0.881
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 
 0.880
YKT6
Synaptobrevin homolog YKT6.
   
 
 0.860
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.