Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107205595Protein farnesyltransferase subunit beta-like. (409 aa)    
Predicted Functional Partners:
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
    
 0.998
ZMPSTE24
CAAX prenyl protease 1 homolog isoform X1.
     
 0.940
DHDDS
Dehydrodolichyl diphosphate synthase complex subunit DHDDS.
     
 0.939
PDSS1
Decaprenyl-diphosphate synthase subunit 1 isoform X1.
   
 0.931
PDSS2
Decaprenyl-diphosphate synthase subunit 2.
   
 0.924
NUS1
Dehydrodolichyl diphosphate synthase complex subunit NUS1.
     
 0.914
FDFT1
Farnesyl-diphosphate farnesyltransferase.
     
 0.829
ACTR2
Actin-related protein 2 isoform X1.
    
   0.619
PGGT1B
LOW QUALITY PROTEIN: geranylgeranyl transferase type-1 subunit beta.
    
 
 0.602
DYRK1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A.
    
   0.599
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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