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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID4BAT-rich interactive domain-containing protein 4B isoform X2. (1232 aa)    
Predicted Functional Partners:
ACTL6A
Actin-like protein 6A.
   
 0.993
ACTL6B
Actin-like protein 6B.
   
 0.993
SIN3A
Paired amphipathic helix protein Sin3a.
    
 0.992
SIN3B
Paired amphipathic helix protein Sin3b.
    
 0.992
PHF12
PHD finger protein 12 isoform X1.
    
 
 0.991
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.986
RBBP4
Histone-binding protein RBBP4.
   
 0.981
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.981
WDR73
WD repeat-containing protein 73 isoform X1.
   
 0.981
BRMS1L
Breast cancer metastasis-suppressor 1 and related proteins.
   
 0.980
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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