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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000004579annotation not available (219 aa)    
Predicted Functional Partners:
NFKBIA
NF-kappa-B inhibitor alpha.
   
 0.897
NFKB1
Nuclear factor NF-kappa-B p105 subunit isoform X1.
   
0.805
NFKB2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2.
   
0.805
CREBBP
CREB-binding protein isoform X1.
    
 0.800
NFKBIE
NF-kappa-B inhibitor epsilon.
   
 0.790
SETD6
N-lysine methyltransferase SETD6 isoform X1.
    
 0.774
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.769
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
    
 0.730
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.720
ANKRD6
Ankyrin repeat domain-containing protein 6 isoform X1.
   
 0.709
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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