STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPSE2Inactive heparanase-2 isoform X1. (582 aa)    
Predicted Functional Partners:
HPSE
Heparanase.
  
  
0.903
IDS
Iduronate 2-sulfatase isoform X1.
     
 0.900
SDC1
Syndecan 1.
     
 0.672
LRIG2
Leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1.
      
 0.533
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like.
      
 0.444
AGRN
Zinc finger protein 865-like.
     
 0.413
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.