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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYROXD2Pyridine nucleotide-disulphide oxidoreductase domain 2. (612 aa)    
Predicted Functional Partners:
FDFT1
Farnesyl-diphosphate farnesyltransferase.
  
 
 0.802
NDUFAF6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2.
  
 
 0.780
GPD2
Glycerol-3-phosphate dehydrogenase, mitochondrial-like.
     
 0.616
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
  
 
 0.573
TPD52L2
TPD52 like 2.
      
 0.533
KMO
Kynurenine 3-monooxygenase.
  
 
 0.477
LOC107200649
Isopentenyl-diphosphate Delta-isomerase 1 isoform X1.
  
  
 0.450
SORD
L-iditol 2-dehydrogenase.
  
  
 0.445
COQ3
Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase.
  
  
 0.443
IARS2
Isoleucine--tRNA ligase, mitochondrial.
      
 0.443
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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