close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5539S ribosomal protein L55, mitochondrial isoform X1. (127 aa)    
Predicted Functional Partners:
MRPS30
28S ribosomal protein S30, mitochondrial.
   
 
 0.942
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.937
MRPL51
39S ribosomal protein L51, mitochondrial.
   
 
 0.932
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.930
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.923
MRPL43
39S ribosomal protein L43, mitochondrial.
   
 
 0.912
MRPS25
28S ribosomal protein S25, mitochondrial.
   
 
 0.912
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
   
 
 0.906
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.905
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.902
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.