Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PABPC1LPolyadenylate-binding protein 1-like isoform X2. (595 aa)    
Predicted Functional Partners:
PABPC4
Polyadenylate-binding protein 4 isoform X1.
  
  
 
0.901
PABPC1
Polyadenylate-binding protein 1.
  
  
 
0.901
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3 isoform X1.
   
 0.868
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1 isoform X1.
   
 0.859
PAIP1
Polyadenylate-binding protein-interacting protein 1 isoform X1.
   
 0.859
UPF1
UPF1 RNA helicase and ATPase.
   
 0.852
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.848
EIF4A2
Eukaryotic initiation factor 4A-II.
   
 0.844
ENSPMJP00000002422
annotation not available
   
 0.844
PABPN1L
Embryonic polyadenylate-binding protein 2.
  
 0.822
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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