Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CST3Cystatin-like. (182 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A.
   
 0.592
CTSB
Cathepsin B.
    
 0.513
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.505
CYCS
Cytochrome c.
    
 0.474
NPVF
Pro-FMRFamide-related neuropeptide VF.
    
 0.474
ENSPMJP00000025103
annotation not available
    
 0.474
REN
Renin.
    
 0.462
LGMN
Legumain.
    
 
 0.444
UQCR10
Ubiquinol-cytochrome c reductase subunit 9.
   
 
 0.437
AVEN
Cell death regulator Aven.
    
 0.409
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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