close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX5Sorting nexin-5 isoform X1. (404 aa)    
Predicted Functional Partners:
SNX6
Sorting nexin-6 isoform X1.
  
  
 
0.901
SNX1
Sorting nexin-1/2.
   
0.872
SNX2
Sorting nexin-2 isoform X1.
   
0.871
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.730
SNX4
Sorting nexin-4 isoform X1.
   
 0.708
SNX8
Sorting nexin-8 isoform X1.
   
 0.684
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
    
 
 0.675
IGF2R
Cation-independent mannose-6-phosphate receptor.
     
 0.672
SNX7
Sorting nexin-7 isoform X1.
   
0.669
SNX30
Sorting nexin-7/30.
   
0.665
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.