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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000004866annotation not available (169 aa)    
Predicted Functional Partners:
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.935
TADA3
Transcriptional adapter 3.
    
 0.934
TAF10
Transcription initiation factor TFIID subunit 10.
    
 0.931
ENY2
Enhancer of yellow 2 transcription factor.
   
 0.929
TAF9
Transcription initiation factor TFIID subunit 9B.
   
 0.927
SUPT3H
Transcription initiation protein SPT3 homolog isoform X1.
    
 0.922
TADA1
Transcriptional adapter 1 isoform X1.
    
 
 0.848
MOCS2
Molybdopterin synthase catalytic subunit.
    
 
 0.817
ENSPMJP00000023344
annotation not available
    
 0.809
TRRAP
Transformation/transcription domain-associated protein isoform X1.
    
 0.809
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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