Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
DZANK1Double zinc ribbon and ankyrin repeat-containing protein 1 isoform X1. (760 aa)    
Predicted Functional Partners:
ENSPMJP00000008356
annotation not available
      
 0.647
CEP128
Centrosomal protein of 128 kDa isoform X1.
      
 0.547
TSPAN9
Tetraspanin-9 isoform X1.
      
 0.539
ZMYND12
Zinc finger MYND domain-containing protein 12 isoform X1.
      
 0.538
POLR3F
DNA-directed RNA polymerase III subunit RPC6.
      
 0.535
SVOPL
Putative transporter SVOPL.
      
 0.519
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit isoform X1.
      
 0.454
RPE
Ribulose-phosphate 3-epimerase isoform X1.
      
 0.453
GUCY2F
Guanylate cyclase 2F, retinal.
      
 0.434
ILKAP
Integrin-linked kinase-associated serine/threonine phosphatase 2C isoform X1.
      
 0.433
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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