STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACKR2Atypical chemokine receptor 2. (446 aa)    
Predicted Functional Partners:
CCL19
C-C motif chemokine 21-like.
    
 0.697
ENSPMJP00000014514
annotation not available
      
 0.677
CCL28
C-C motif chemokine 28.
     
 0.629
LOC107212843
C-C motif chemokine 4 homolog.
    
 0.626
CXCL12
Stromal cell-derived factor 1.
    
 0.605
ACKR1
Atypical chemokine receptor 1.
  
   
 0.584
KNL1
Protein CASC5 isoform X1.
  
 
  0.460
CCR7
C-C chemokine receptor type 7.
      
0.455
CD8A
T-cell surface glycoprotein CD8 alpha chain isoform X1.
      
 0.420
LOC107209691
C-X3-C motif chemokine 1.
  
 
 0.410
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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