STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPDC1Protein tyrosine phosphatase domain-containing protein 1 isoform X2. (828 aa)    
Predicted Functional Partners:
CCDC73
Coiled-coil domain-containing protein 73 isoform X1.
      
 0.631
ITSN2
Intersectin-2 isoform X1.
    
  0.619
ERCC6L
DNA excision repair protein ERCC-6-like.
   
  
 0.615
TGFBR2
TGF-beta receptor type-2.
    
 0.545
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
    
 
 0.535
GPER1
G-protein coupled estrogen receptor 1.
      
 0.533
WLS
Protein wntless homolog.
    
 0.526
IPPK
Inositol-pentakisphosphate 2-kinase isoform X1.
      
 0.524
ERCC6L2
DNA excision repair protein ERCC-6-like 2.
   
  
 0.450
RYK
Tyrosine-protein kinase RYK isoform X1.
    
 0.447
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.