Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000005000annotation not available (246 aa)    
Predicted Functional Partners:
ENSPMJP00000004447
annotation not available
   
 0.901
RAB1A
LOW QUALITY PROTEIN: ras-related protein Rab-1A.
    
 0.844
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
    
 0.842
USO1
General vesicular transport factor p115 isoform X1.
   
 0.839
GORASP1
Golgi reassembly-stacking protein 1.
    
 0.775
GORASP2
Golgi reassembly-stacking protein 2 isoform X1.
    
 0.775
ALG11
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X1.
   
  
 0.702
ZSWIM7
Zinc finger SWIM domain-containing protein 7.
      
 0.686
SCFD1
Sec1 family domain-containing protein 1.
   
 0.671
GOSR2
Golgi SNAP receptor complex member 2 isoform X1.
     
 0.658
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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