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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VILLVillin-like protein isoform X1. (869 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 
 0.615
COG6
Conserved oligomeric Golgi complex subunit 6 isoform X1.
    
 
 0.588
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
  0.576
COG3
Conserved oligomeric Golgi complex subunit 3 isoform X1.
    
 
 0.564
CHPT1
Diacylglycerol cholinephosphotransferase.
      
 0.527
AKAP12
A-kinase anchor protein 12.
      
 0.527
COG4
Conserved oligomeric Golgi complex subunit 4.
    
 
 0.451
SMIM7
Small integral membrane protein 7 isoform X1.
    
 
 0.451
WASL
Neural Wiskott-Aldrich syndrome protein isoform X1.
    
 
 0.443
MYO3A
Myosin-IIIa isoform X1.
     
 0.440
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.