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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000005118annotation not available (178 aa)    
Predicted Functional Partners:
MTO1
TRNA uridine 5-carboxymethylaminomethyl modification enzyme.
 
 0.963
GTPBP8
GTP-binding protein 8.
    
 
 0.945
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
  
 0.904
ERGIC1
Endoplasmic reticulum-Golgi intermediate compartment protein 1.
  
 0.904
ERGIC2
Endoplasmic reticulum-Golgi intermediate compartment protein 2 isoform X1.
  
 0.904
MRPL15
39S ribosomal protein L15, mitochondrial.
    
 
 0.902
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 
 0.889
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.879
MRM3
16S rRNA (guanosine(1370)-2'-O)-methyltransferase.
   
 
 0.876
MRPL3
Mitochondrial ribosomal protein L3.
    
 
 0.843
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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