Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACO2Aconitase 2. (784 aa)    
Predicted Functional Partners:
CS
Citrate synthase, mitochondrial.
  
 0.999
IDH3A
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial.
  
 0.998
LOC107199392
Isocitrate dehydrogenase (NAD+).
  
 0.996
IDH2
Isocitrate dehydrogenase [NADP], mitochondrial.
  
 0.992
IDH1
Isocitrate dehydrogenase [NADP] cytoplasmic.
  
 0.992
MDH2
Malate dehydrogenase, mitochondrial.
  
 0.991
FH
Fumarate hydratase, mitochondrial.
  
 0.984
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
  
 0.983
ACLY
ATP-citrate synthase isoform X1.
  
 0.971
ATP5F1B
F-type H+-transporting ATPase subunit beta.
  
 0.964
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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