STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXW4F-box/WD repeat-containing protein 4 isoform X1. (408 aa)    
Predicted Functional Partners:
CUL1
Cullin-1 isoform X1.
    
 0.964
SKP1
S-phase kinase-associated protein 1.
    
 0.933
TXNDC9
Thioredoxin domain-containing protein 9.
    
   0.928
CCT4
T-complex protein 1 subunit delta.
    
 0.909
CCT5
T-complex protein 1 subunit epsilon.
    
  0.907
CCT3
T-complex protein 1 subunit gamma.
    
  0.899
CCT7
T-complex protein 1 subunit eta.
    
  0.886
CCT8
T-complex protein 1 subunit theta isoform X1.
    
  0.864
PDCL3
Phosducin-like protein 3.
    
   0.863
TCP1
T-complex protein 1 subunit alpha.
    
  0.792
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.