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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB10EF-hand calcium-binding domain-containing protein 10-like. (128 aa)    
Predicted Functional Partners:
HSBP1
Heat shock factor binding protein 1.
    
 0.525
HSP90B1
Heat shock protein 90kDa beta.
    
 0.521
TSC1
Tuberous sclerosis 1.
    
 0.513
TRAP1
Heat shock protein 75 kDa, mitochondrial.
    
 0.513
HSP90AB1
LOW QUALITY PROTEIN: heat shock protein HSP 90-beta.
    
 0.513
HSP90AA1
Heat shock protein HSP 90-alpha.
    
 0.513
HYOU1
Hypoxia up-regulated protein 1.
    
 0.469
HSPA14
Heat shock 70 kDa protein 14.
    
 0.465
HSPA9
Stress-70 protein, mitochondrial.
    
 0.444
HSPA5
Endoplasmic reticulum chaperone BiP.
    
 0.444
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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