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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJA1DnaJ homolog subfamily A member 1. (397 aa)    
Predicted Functional Partners:
HSPA5
Endoplasmic reticulum chaperone BiP.
 
 0.833
HSPA2
Heat shock-related 70 kDa protein 2.
 
 0.825
HSPA8
Heat shock cognate 71 kDa protein.
 
 0.825
STIP1
Stress induced phosphoprotein 1.
   
 0.797
HSPA9
Stress-70 protein, mitochondrial.
 
 0.787
HSPA14
Heat shock 70 kDa protein 14.
 
 0.757
HSPA13
Stress 70 protein chaperone microsome-associated 60kDa protein.
 
 0.745
HSPA4
Heat shock 70 kDa protein 4.
 
 0.743
HSPA4L
Heat shock 70 kDa protein 4L.
 
 0.707
HSPH1
Heat shock protein 105 kDa isoform X1.
 
 0.707
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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