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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC62Translocation protein SEC62. (372 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63 homolog.
   
 0.999
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
    
 
 0.990
SEC61B
Protein transport protein SEC61 subunit beta.
    
 
 0.945
SEC61A2
Protein transport protein Sec61 subunit alpha isoform X1.
   
 
 0.908
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 
 0.908
OXSR1
Serine/threonine-protein kinase OSR1/STK39.
    
 
 0.905
STK39
STE20/SPS1-related proline-alanine-rich protein kinase isoform X1.
    
 
 0.905
STRADA
STE20-related kinase adapter protein alpha isoform X1.
    
 
 0.750
STRADB
STE20-related kinase adapter protein beta isoform X1.
    
 
 0.750
HSPA5
Endoplasmic reticulum chaperone BiP.
    
 
 0.686
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.