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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABP2Calcium binding protein 2. (292 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.693
ARL3
ADP-ribosylation factor-like protein 3.
   
 0.680
NPHP3
Nephrocystin-3.
    
 0.642
WDR90
Mitochondrial Rho GTPase 2.
   
 0.552
DCLK1
Serine/threonine-protein kinase DCLK1 isoform X1.
   
 0.507
TNNI1
Troponin I, slow skeletal muscle isoform X4.
   
 0.471
TNNI2
Troponin I, fast skeletal muscle.
   
 0.471
XPC
DNA repair protein complementing XP-C cells isoform X1.
    
 0.439
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.438
PHKG1
Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform.
   
 0.433
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.