NDUFAF3 protein (Parus major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NDUFAF3

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3. (176 aa)

Predicted Functional Partners:

NDUFAF4

0.996

TIMMDC1

0.993

NDUFA8

0.990

NDUFAF1

0.989

NDUFS8

0.987

NDUFS7

0.987

NDUFS3

0.983

NDUFAF5

0.978

NDUFB10

0.973

ND6

0.970

Your Current Organism:

Parus major

NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ND6	NDUFA8	ENSPMJP00000000014	ENSPMJP00000000484	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	0.948
ND6	NDUFAF1	ENSPMJP00000000014	ENSPMJP00000019203	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1.	0.686
ND6	NDUFAF3	ENSPMJP00000000014	ENSPMJP00000005699	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.	0.970
ND6	NDUFAF4	ENSPMJP00000000014	ENSPMJP00000001444	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 isoform X1.	0.693
ND6	NDUFAF5	ENSPMJP00000000014	ENSPMJP00000001574	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 isoform X1.	0.543
ND6	NDUFB10	ENSPMJP00000000014	ENSPMJP00000023967	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH:ubiquinone oxidoreductase subunit B10.	0.946
ND6	NDUFS3	ENSPMJP00000000014	ENSPMJP00000001060	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial.	0.994
ND6	NDUFS7	ENSPMJP00000000014	ENSPMJP00000015389	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial.	0.970
ND6	NDUFS8	ENSPMJP00000000014	ENSPMJP00000004435	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.966
NDUFA8	ND6	ENSPMJP00000000484	ENSPMJP00000000014	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.948
NDUFA8	NDUFAF1	ENSPMJP00000000484	ENSPMJP00000019203	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1.	0.893
NDUFA8	NDUFAF3	ENSPMJP00000000484	ENSPMJP00000005699	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.	0.990
NDUFA8	NDUFAF4	ENSPMJP00000000484	ENSPMJP00000001444	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 isoform X1.	0.773
NDUFA8	NDUFAF5	ENSPMJP00000000484	ENSPMJP00000001574	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 isoform X1.	0.700
NDUFA8	NDUFB10	ENSPMJP00000000484	ENSPMJP00000023967	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH:ubiquinone oxidoreductase subunit B10.	0.999
NDUFA8	NDUFS3	ENSPMJP00000000484	ENSPMJP00000001060	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial.	0.999
NDUFA8	NDUFS7	ENSPMJP00000000484	ENSPMJP00000015389	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial.	0.999
NDUFA8	NDUFS8	ENSPMJP00000000484	ENSPMJP00000004435	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.999
NDUFA8	TIMMDC1	ENSPMJP00000000484	ENSPMJP00000016166	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	Complex I assembly factor TIMMDC1, mitochondrial.	0.982
NDUFAF1	ND6	ENSPMJP00000019203	ENSPMJP00000000014	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1.	NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.686