Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRGReceptor-type tyrosine-protein phosphatase gamma. (1305 aa)    
Predicted Functional Partners:
CNTN6
Contactin-6 isoform X1.
    
 
 0.802
CNTN3
Contactin 3.
    
 
 0.678
LUM
Lumican.
    
 0.654
GRIN3A
Glutamate receptor ionotropic, NMDA 3A isoform X1.
    
 
 0.651
CNTN5
Contactin-5 isoform X1.
    
 
 0.651
CIB3
Calcium and integrin-binding family member 3 isoform X1.
    
 
 0.637
CRADD
CASP2 and RIPK1 domain containing adaptor with death domain.
      
 0.629
CNTN4
Contactin 4.
    
 
 0.618
PTPN14
Tyrosine-protein phosphatase non-receptor type 14/21.
    
 0.617
PTPRE
Receptor-type tyrosine-protein phosphatase epsilon isoform X1.
   
 0.609
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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