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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MON1AVacuolar fusion protein MON1 homolog A isoform X1. (625 aa)    
Predicted Functional Partners:
CCZ1
Vacuolar fusion protein CCZ1 homolog.
    
 0.998
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 
 0.970
RAB7A
Ras-related protein Rab-7A.
    
 0.899
RAB9A
Ras-related protein Rab-9A isoform X1.
    
 0.883
RAB9B
Ras-related protein Rab-9B.
    
 0.883
RAB7B
Ras-related protein Rab-7b isoform X1.
    
 0.835
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.824
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
    
 
 0.774
TGFBRAP1
Transforming growth factor-beta receptor-associated protein 1.
   
 
 0.756
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 
 0.735
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.