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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF7L2Transcription factor 7-like 2 isoform X1. (486 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.994
NLK
Serine/threonine-protein kinase NLK isoform X1.
    
 0.982
LEF1
Lymphoid enhancer-binding factor 1 isoform X1.
    
0.960
CREBBP
CREB-binding protein isoform X1.
   
 0.953
EP300
Histone acetyltransferase p300 isoform X1.
   
 0.952
CTBP2
C-terminal-binding protein 2 isoform X1.
    
 0.947
LOC107210813
C-terminal-binding protein 2.
    
 0.947
CTBP1
C-terminal-binding protein 1 isoform X1.
    
 0.947
SOX17
Transcription factor SOX17 (SOX group F).
    
0.942
RUVBL1
RuvB-like protein 1 (pontin 52).
    
  0.940
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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