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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUSC2Iporin isoform X1. (1577 aa)    
Predicted Functional Partners:
LOC107200649
Isopentenyl-diphosphate Delta-isomerase 1 isoform X1.
  
 
 0.927
FDFT1
Farnesyl-diphosphate farnesyltransferase.
  
 0.865
MVD
Diphosphomevalonate decarboxylase.
  
 0.842
RAB35
Ras-related protein Rab-35.
    
 
 0.780
LSS
Lanosterol synthase.
  
 
 0.770
GGPS1
Geranylgeranyl diphosphate synthase, type III.
    
 0.750
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
  
 
 0.739
DHDDS
Dehydrodolichyl diphosphate synthase complex subunit DHDDS.
  
 
 0.670
UBIAD1
UbiA prenyltransferase domain-containing protein 1 isoform X1.
    
 0.664
ATG9A
Autophagy-related protein 9A.
    
 
 0.662
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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