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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF1Ras association domain family member 1. (342 aa)    
Predicted Functional Partners:
SAV1
Protein salvador homolog 1.
    
 
 0.718
RASSF5
Ras association domain-containing protein 5 isoform X2.
    
 
0.710
STK4
Serine/threonine-protein kinase 4 isoform X1.
    
 0.646
STK3
Serine/threonine-protein kinase 3 isoform X1.
    
 0.646
NPRL2
NPR2 like, GATOR1 complex subunit.
      
 0.638
RASL11B
Ras-like protein family member 11B.
    
 
 0.562
XPA
DNA repair protein complementing XP-A cells isoform X1.
    
 
 0.553
CNKSR1
Connector enhancer of kinase suppressor of Ras 1.
    
 
 0.543
SEMA3F
Semaphorin-3F-like isoform X2.
      
 0.538
CDH13
Cadherin 13, H-cadherin.
      
 0.533
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.