STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD1Tudor domain-containing protein 1 isoform X1. (890 aa)    
Predicted Functional Partners:
PIWIL1
Piwi-like protein 1.
   
 0.848
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.784
TDRD12
Putative ATP-dependent RNA helicase TDRD12.
    
 0.605
MOV10L1
RNA helicase Mov10l1 isoform X1.
    
 0.527
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1.
   
 0.523
TDRD9
Putative ATP-dependent RNA helicase TDRD9 isoform X1.
   
0.520
AKAP1
A-kinase anchor protein 1, mitochondrial.
   
0.416
MOV10
Putative helicase MOV-10 isoform X1.
    
 0.404
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.