STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOCTNocturnin. (470 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X6.
   
 0.849
CNOT9
Cell differentiation protein RCD1 homolog isoform X1.
    
 0.846
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.845
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
    
 0.822
DDX6
DEAD-box helicase 6.
    
 0.760
CNOT7
CCR4-NOT transcription complex subunit 7/8.
    
 0.744
CNOT8
CCR4-NOT transcription complex subunit 7/8.
    
 0.744
CDC73
Cell division cycle 73.
   
 
 0.675
ENSPMJP00000007827
annotation not available
   
 
 0.636
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.616
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.